This course covers the principles of molecular genetics, introducing the molecular mechanisms involved in the storage and expression of genetic information in both prokaryotes and eukaryotes. Topics to be covered include: genome structure and evolution, DNA structure and packaging; DNA replication and repair; transcription; regulation of gene expression; RNA processing; protein synthesis and the genetic code. These processes will be illustrated with case studies, focussing especially on the human genome and genetic disease. The course includes a lab project that reinforces lecture material and introduces students to key strategies and techniques of molecular genetics.

Note: Graduate students attend joint classes with undergraduates but are assessed separately.

Learning Outcomes

Upon successful completion, students will have the knowledge and skills to:

On satisfying the requirements of this course, students will have the knowledge and skills to:

1. Explain the basic processes involved in the expression of genetic information (DNA replication; mutagenesis and DNA repair; mRNA transcription and processing; gene regulation; protein synthesis; genome structure and evolution)
2. Apply knowledge of the roles and functions of these processes to a range of problems and examples
3. Predict outcomes when these processes are perturbed by mutation (genetic disease) or the use of inhibitors and drugs
4. Elucidate differences in gene organization between prokaryotes and eukaryotes
5. Interpret and analyse experimental and theoretical problems involving these processes
6. Apply knowledge and research applications for example, in designing experiments or analysing examples from the literature
7. Communicate experimental results and conclusions in a scientific report
   

Research-Led Teaching

BIOL6161 encourages students to develop a critical attitude towards science and to understand its evidence-based nature. Students will have opportunities to discuss case studies, problems and questions in class and online. These will be based on topical issues and applications of the material covered. Contemporary and historical controversies in genetics will also be introduced. These activities aim to show students how science evolves, as well as the relevance of genetics. The practical component consists of a semester-long research project in which students isolate and analyse mutants, giving them an opportunity to experience experimental strategies in genetics and use fundamental techniques. This also provides experience in recording, handling and interpreting both quantitative and qualitative data obtained in the experiments. The emphasis in the practical project is on generating and evaluating data because students must use experimental evidence to support a conclusion about the genotypes of the mutants they have isolated.

Recommended Resources

The textbook is Genetics: A Conceptual Approach by Benjamin Pierce, 6th edition

Staff Feedback

Students will be given feedback in the following forms in this course:

• Written comments on lab reports
• Explanations of correct answers and common mistakes for tests
• Online multiple choice question bank
• Feedback to the whole class through in-lecture activities to test understanding and discussions of lab reports.

Student Feedback

ANU is committed to the demonstration of educational excellence and regularly seeks feedback from students. Students are encouraged to offer feedback directly to their Course Convener or through their College and Course representatives (if applicable). The feedback given in these surveys is anonymous and provides the Colleges, University Education Committee and Academic Board with opportunities to recognise excellent teaching, and opportunities for improvement. The Surveys and Evaluation website provides more information on student surveys at ANU and reports on the feedback provided on ANU courses.

Other Information

Adjustments to delivery in 2020

Course delivery and assessment in 2020 was adjusted due to the COVID-19 pandemic. Any information below that replaces what was published in the Class Summary for Semester 1, 2020 was approved by the Associate Dean Education (as is required after 10% commencement of a course). Where an activity or assessment is not referenced below, it remains unchanged.

Teaching Activities

·      Lectures – all lectures were pre-recorded from 2019 and available through Wattle.

·      Practicals-were replaced by video and text resources.

Assessment

Adjustments were made to assignment due dates; for details see the course Wattle site.

·      Practical reports each of the last two reports were split into three parts; an experimental protocol quiz, based on resources provided worth 2%; a pre-lab worth 3%, and the report which was based on data supplied to students.

·      Final Exam – was delivered as a timed quiz on Wattle.

Class Schedule

Week/Session	Summary of Activities	Assessment
1	Module 1 DNA replication and repair; weeks 1-3	Test, pre-lab assignment and practical report
2	Module 2 Gene structure, expression and regulation in prokaryotes; weeks 4-6	Test, pre-lab assignment and practical report
3	Module 3 Gene structure, expression and regulation in eukaryotes; weeks 7-9	Test
4	Module 4 Genomes and evolution; weeks 10-11	Test, pre-lab assignment and practical report
5	Module 5 Case studies and revision; weeks 11-12

Tutorial Registration

The class will be split into three groups for practical classes. All BIOL6161 students should select Group B. Information on how to select a group is available on Wattle.

Assessment Summary

Assessment task	Value	Due Date	Return of assessment	Learning Outcomes
Laboratory reports	36 %	*	*	2,3,5,6,7
Tests	20 %	*	*	1,2,3,4
Assignments	9 %	*	*	3,5,6,7
End of Semester Exam	30 %	04/06/2020	02/07/2020	1,2,3,4,5,6,7
PeerWise participation	5 %	28/02/2020	17/05/2020	1-5

* If the Due Date and Return of Assessment date are blank, see the Assessment Tab for specific Assessment Task details

Policies

ANU has educational policies, procedures and guidelines, which are designed to ensure that staff and students are aware of the University’s academic standards, and implement them. Students are expected to have read the Academic Misconduct Rule before the commencement of their course. Other key policies and guidelines include:

• Student Assessment (Coursework) Policy and Procedure
• Special Assessment Consideration Policy and General Information 
• Student Surveys and Evaluations
• Deferred Examinations
• Student Complaint Resolution Policy and Procedure

Assessment Requirements

The ANU is using Turnitin to enhance student citation and referencing techniques, and to assess assignment submissions as a component of the University's approach to managing Academic Integrity. For additional information regarding Turnitin please visit the Academic Integrity . In rare cases where online submission using Turnitin software is not technically possible; or where not using Turnitin software has been justified by the Course Convener and approved by the Associate Dean (Education) on the basis of the teaching model being employed; students shall submit assessment online via ‘Wattle’ outside of Turnitin, or failing that in hard copy, or through a combination of submission methods as approved by the Associate Dean (Education). The submission method is detailed below.

Moderation of Assessment

Marks that are allocated during Semester are to be considered provisional until formalised by the College examiners meeting at the end of each Semester. If appropriate, some moderation of marks might be applied prior to final results being released.

Examination(s)

The final exam is worth 30% of your grade. It will cover the entire course and will include some questions that require integration of the material in different modules and the practical course. A pass in your aggregate mark for the final exam plus the four tests is required to pass the course overall.

Please note, that where a date range is used in the Assessment Summary in relation to exams, the due date and return date indicate the approximate timeframe in which the exam will be held and results returned to the student (official end of Semester results released on ISIS). Students should consult the course wattle site and the ANU final examination timetable to confirm the date, time and venue of the exam.

Assessment Task 1

Laboratory reports

You will write a full report for each of the three practical experiments and these will be submitted through Turnitin. Guides, report sheets and marking rubrics are provided in the lab manual and on Wattle.

The due dates for the three lab reports are: 23rd March, 20th April and 18th May at 11.55 pm.

Assessment Task 2

Tests

There will be 4 online tests worth 5% each, one covering each of the first 4 modules. Tests will be open for 30 hours from 6 pm Wednesday to midnight Thursday in weeks 4,6,9 and 11. Marks and feedback will be provided through Wattle one week after the test.

Assessment Task 3

Assignments

There will be a pre-lab assignment to be submitted on the day of the practical for each of the three experiments. These will prepare you for the lab and help you link theory and practical experience.

They will be submitted by 2 pm on the day of the practical and returned within one week.

Please note there are multiple activities associated with this task, each with individual due dates.

Assessment Task 4

End of Semester Exam

The date range in the Assessment Summary indicates the start of the end of semester exam period and the date official end of semester results are released on ISIS. Please check the ANU final Examination Timetable http://www.anu.edu.au/students/program-administration/assessments-exams/examination-timetable to confirm the date, time and location of the mid-semester exam.

Assessment Task 5

PeerWise participation

PeerWise is an online resource that enables students to write, answer and comment on multiple choice questions. Marks will be allocated according to the level of participation, with requirements for numbers of questions answered, comment on and written. Students are expected to contribute on an on-going basis throughout the semester. Further details are available on the Wattle site.

Academic Integrity

Academic integrity is a core part of the ANU culture as a community of scholars. At its heart, academic integrity is about behaving ethically, committing to honest and responsible scholarly practice and upholding these values with respect and fairness.

The ANU commits to assisting all members of our community to understand how to engage in academic work in ways that are consistent with, and actively support academic integrity. The ANU expects staff and students to be familiar with the academic integrity principle and Academic Misconduct Rule, uphold high standards of academic integrity and act ethically and honestly, to ensure the quality and value of the qualification that you will graduate with.

The Academic Misconduct Rule is in place to promote academic integrity and manage academic misconduct. Very minor breaches of the academic integrity principle may result in a reduction of marks of up to 10% of the total marks available for the assessment. The ANU offers a number of online and in person services to assist students with their assignments, examinations, and other learning activities. Visit the Academic Skills website for more information about academic integrity, your responsibilities and for assistance with your assignments, writing skills and study.

Online Submission

You will be required to electronically sign a declaration as part of the submission of your assignment. Please keep a copy of the assignment for your records. Unless an exemption has been approved by the Associate Dean (Education) submission must be through Turnitin.

Hardcopy Submission

For some forms of assessment (hand written assignments, art works, laboratory notes, etc.) hard copy submission is appropriate when approved by the Associate Dean (Education). Hard copy submissions must utilise the Assignment Cover Sheet. Please keep a copy of tasks completed for your records.

Late Submission

Late submission of assessment tasks without an extension are penalised at the rate of 5% of the possible marks available per working day or part thereof. Late submission of assessment tasks is not accepted after 10 working days after the due date, or on or after the date specified in the course outline for the return of the assessment item.

Referencing Requirements

Accepted academic practice for referencing sources that you use in presentations can be found via the links on the Wattle site, under the file named “ANU and College Policies, Program Information, Student Support Services and Assessment”. Alternatively, you can seek help through the Students Learning Development website.

Returning Assignments

Marks and feedback for each test will be provided online 1 week after the test closes.

Lab reports will be returned two weeks after submission.

PeerWise marks will be allocated two weeks after the final deadline.

Extensions and Penalties

Extensions and late submission of assessment pieces are covered by the Student Assessment (Coursework) Policy and Procedure. Extensions may be granted for assessment pieces that are not examinations or take-home examinations. If you need an extension, you must request an extension in writing on or before the due date. If you have documented and appropriate medical evidence that demonstrates you were not able to request an extension on or before the due date, you may be able to request it after the due date.

Privacy Notice

The ANU has made a number of third party, online, databases available for students to use. Use of each online database is conditional on student end users first agreeing to the database licensor’s terms of service and/or privacy policy. Students should read these carefully. In some cases student end users will be required to register an account with the database licensor and submit personal information, including their: first name; last name; ANU email address; and other information.
In cases where student end users are asked to submit ‘content’ to a database, such as an assignment or short answers, the database licensor may only use the student’s ‘content’ in accordance with the terms of service – including any (copyright) licence the student grants to the database licensor. Any personal information or content a student submits may be stored by the licensor, potentially offshore, and will be used to process the database service in accordance with the licensors terms of service and/or privacy policy.
If any student chooses not to agree to the database licensor’s terms of service or privacy policy, the student will not be able to access and use the database. In these circumstances students should contact their lecturer to enquire about alternative arrangements that are available.

Distribution of grades policy

Academic Quality Assurance Committee monitors the performance of students, including attrition, further study and employment rates and grade distribution, and College reports on quality assurance processes for assessment activities, including alignment with national and international disciplinary and interdisciplinary standards, as well as qualification type learning outcomes.

Since first semester 1994, ANU uses a grading scale for all courses. This grading scale is used by all academic areas of the University.

Support for students

The University offers students support through several different services. You may contact the services listed below directly or seek advice from your Course Convener, Student Administrators, or your College and Course representatives (if applicable).

• ANU Health, safety & wellbeing for medical services, counselling, mental health and spiritual support
• ANU Diversity and inclusion for students with a disability or ongoing or chronic illness
• ANU Dean of Students for confidential, impartial advice and help to resolve problems between students and the academic or administrative areas of the University
• ANU Academic Skills and Learning Centre supports you make your own decisions about how you learn and manage your workload.
• ANU Counselling Centre promotes, supports and enhances mental health and wellbeing within the University student community.
• ANUSA supports and represents undergraduate and ANU College students
• PARSA supports and represents postgraduate and research students