The integration of molecular biology, biochemistry, genetics, next-generation sequencing, genome editing and cell biology has had an enormous impact on plant science in recent years. This course will present current understanding in several key areas and demonstrate how conceptual and technical advances provide new insights in plant biology and new approaches for crop improvement and agriculture. Two introductory lectures will be given on plant structure and function prior to the major topics, which will include plant development, nitrogen fixation, epigenetics and regulation of gene expression, next-generation tools for crop improvement, photosynthesis, structural biology in plants, plant immunity, and redox regulation and signalling. Each topic will be presented by a researcher from the Research School of Biology or CSIRO Agriculture and Food.

BIOL3177 is an advanced course that requires a basic understanding in one, or preferably more, of the areas of molecular biology, biochemistry, genetics, cell biology or plant structure and function.

Honours Pathway Option (HPO)

Entry to this option will be subject to the approval of the course conveners. Students who take this option will be required to present a seminar on a research paper. The seminar will be assessed and will replace part of the assessment for tutorial quizzes and the essay.

Learning Outcomes

Upon successful completion, students will have the knowledge and skills to:

1. Understand and describe the problems being addressed and the advances achieved in molecular plant science
2. Understand and describe several advanced molecular techniques and how they are being used to achieve advances in molecular plant science
3. Search bibliographic databases to identify papers reporting recent advances in specific areas of molecular plant science and to distill, integrate, evaluate and discuss the important findings of these papers in writing
4. Understand a selection of plant-science-related molecular techniques and to present and interpret data generated by these techniques in writing.
5. For HPO students: Analyse in depth, and critically evaluate, papers reporting recent advances in molecular plant science, and present orally the findings of the papers, placing them in context and providing critical commentary, using appropriate visual aids

Research-Led Teaching

Each lecture module is given by an ANU or CSIRO researcher undertaking leading internationally-recognised research in an area covered by their lecture topic.

Field Trips

Not applicable

Additional Course Costs

No additional fees are charged in association with this course

Examination Material or equipment

None

Required Resources

All reading material will be provided on Wattle or is accessible through the ANU library.

Recommended Resources

Plant science research and review journals available through the ANU library.

Staff Feedback

Students will be given feedback in the following forms in this course:

• Written comments
• Verbal comments
• Feedback to individuals

Student Feedback

ANU is committed to the demonstration of educational excellence and regularly seeks feedback from students. Students are encouraged to offer feedback directly to their Course Convener or through their College and Course representatives (if applicable). The feedback given in these surveys is anonymous and provides the Colleges, University Education Committee and Academic Board with opportunities to recognise excellent teaching, and opportunities for improvement. The Surveys and Evaluation website provides more information on student surveys at ANU and reports on the feedback provided on ANU courses.

Other Information

This course is an Honours Pathway Option.

• Non HPO assessment will be based on tasks 1, 2, 3 and 4
• HPO assessment will be based on tasks 1, 2, 3 and an additional task 4 (below) noting that the % value of the task 3 will be adjusted as per the detail in the assessment detail box.

Assessment Task 4- HPO students only:

Journal Club Essay

The essay reviews recent advances made in an area of research related to one of the lecture modules. The review is approximately 2,000 words in length (plus or minus 10%). The essay will be based on one of four ‘seed papers’ proposed by lecturers in the course. The topic of the essay must be different to the one chosen for the seminar presentation (assessment tasks 1 and 2 above). Copies of the four ‘seed papers' are available on Wattle. Students should look at the papers and choose one for their Journal Club Essay, and another for their seminar. Written instructions on how to complete the essay are available on Wattle and will be explained to participating students via a Zoom meeting in the 2nd week of semester. 

Only students who wish to complete the HPO need to complete this assessment. Please talk to the course convener for more information.

Due: 2022-10-21

Returned: 2022-11-04

Value: HPO - 15%

Linked Learning outcomes: 1,2,3,4,5

Teaching Activities

 Lectures will be presented in person, live online for remote attendees and recorded and made available through Wattle. Where possible, copies of lecture slides will be made available on Wattle at least one day prior to their presentation.

Class Schedule

Week/Session	Summary of Activities	Assessment
1	General overview of topics/weeks: Introductory lectures (week 1) Next Gen tools in plant biology (week 1/2) Plant microbiomes (weeks 3/4) Plant responses to changing seasons (weeks 4/5) seminar tutorial (week 5) Imaging plant cell biology (weeks 5/6) Mid-Semester break (2 weeks) Plant disease resistance (weeks 7/8) Synbio tools in plant engineering (weeks 8/9) Cell and organelle signalling (weeks 9/10) Seminars (weeks 11/12) Invited speakers (weeks 7 and 10)	The integration of molecular biology, biochemistry, genetics, next-generation sequencing, genome editing and cell biology has had an enormous impact on plant science in recent years. This course will present current understanding in several key areas and demonstrate how conceptual and technical advances provide new insights in plant biology and new approaches for crop improvement and agriculture. Two introductory lectures will be given on plant structure and function prior to the major topics spanning the seven topics listed in the activity summary. Each topic will be presented by researchers from the Research School of Biology or CSIRO Agriculture and Food.

Tutorial Registration

ANU utilises MyTimetable to enable students to view the timetable for their enrolled courses, browse, then self-allocate to small teaching activities / tutorials so they can better plan their time. Find out more on the Timetable webpage.

Assessment Summary

Assessment task	Value	Due Date	Return of assessment	Learning Outcomes
Pre-seminar outline document and tutorial	5 %	19/08/2022	31/08/2022	1,2,3,4
Seminar: Review of a research topic	20 %	28/10/2022	04/11/2022	1,2,5
Written Lecture Module Exams (LMEs)	75 %	03/08/2022	28/10/2022	1,2,3,4

* If the Due Date and Return of Assessment date are blank, see the Assessment Tab for specific Assessment Task details

Policies

ANU has educational policies, procedures and guidelines, which are designed to ensure that staff and students are aware of the University’s academic standards, and implement them. Students are expected to have read the Academic Misconduct Rule before the commencement of their course. Other key policies and guidelines include:

• Student Assessment (Coursework) Policy and Procedure
• Special Assessment Consideration Policy and General Information
• Student Surveys and Evaluations
• Deferred Examinations
• Student Complaint Resolution Policy and Procedure

Assessment Requirements

The ANU is using Turnitin to enhance student citation and referencing techniques, and to assess assignment submissions as a component of the University's approach to managing Academic Integrity. For additional information regarding Turnitin please visit the ANU Online website Students may choose not to submit assessment items through Turnitin. In this instance you will be required to submit, alongside the assessment item itself, hard copies of all references included in the assessment item.

Moderation of Assessment

Marks that are allocated during Semester are to be considered provisional until formalised by the College examiners meeting at the end of each Semester. If appropriate, some moderation of marks might be applied prior to final results being released.

Participation

Students must present a seminar and attempt at least five of the seven Lecture Module Exams. These are course requirements. Failure to meet either of the course requirements will result in a NCN fail.

Examination(s)

The examination in this course will take the form of seven ~40 min Lecture Module Exams (LMEs) held in the fifth lecture of each of the seven topic modules.

Assessment Task 1

Pre-seminar outline document and tutorial

Details about the seminar are provided under Assessment Task 2 below. To assist in this task, part of the assessment involves preparation of a seminar outline document for review in a 45 min tutorial with a course lecturer. The outline document should provide a description of the structure/sub-headings that you intend to use in the seminar, a list of three to five research papers upon which the seminar will be based and a brief summary (no more than 5 sentences) of the relevance of each research paper to the seed paper upon which the seminar is based. The outline document should be no more than one page in length (single spacing). The due date reflects the deadline for submission of the outline document through in Wattle using Turnitin. The document will be reviewed by the lecturer prior to the pre-seminar tutorial the following week.

Value: 5%

Assessment Task 2

Seminar: Review of a research topic

The seminar will report on recent advances made in an area of research related to one of the lecture modules. The during of the seminar will be 15 minutes followed by 5 min of question time. The content of the seminars will be based on one of four ‘seed papers’ proposed by lecturers in the course. Copies of the four ‘seed papers' will be available on Wattle during the first week of semester. Students should look at the papers and choose one that will form the foundation topic of their seminar. Written instructions on how to prepare and present a seminar will be made available on Wattle and will be explained in the first lecture and again in a pre-seminar tutorial with the respective lecturer in week 5. The due date for the seminars reflect them being run at the end of the course from end of week 11 through to end of week 12. Students unable to attend campus

will be able to present their seminar online. The oral presentations will be marked by the course conveners and lectures.

Value: 20%

Assessment Task 3

Written Lecture Module Exams (LMEs)

The date range for Lecture Module Exams (LMEs) represents the date of the first to that of the last (seventh) lecture module. The LMEs will be held in the 5th lecture of each module. Completion of at least five of the seven LMEs is required to satisfy this assessment task with the result of each LME weighted at 12.5% up to a maximum total summed weighting of 75%. For those who complete all 7 LMEs, the top 6 results will be used to calculate the LME grade worth 75% of the final course grade. The LMEs will be held during the allocated lecture in open-book format with the option of either completing as a hand-written hardcopy in the lecture room or online (in lecture room unless required to work remotely) via a ~40 min timed exam module in Wattle. Each LME mark will be made available through Wattle within two weeks of completion. Further details will be found on the Course Wattle site.

Value:

Non-HPO students - 75%

HPO students - 60% (Each LME will be weighted at 10% up to a maximum total summed weighting of 60% towards final grade for course. The remaining 15% will be for the Journal Club Essay, assessment item #4 as indicated in Other Information below)

Academic Integrity

Academic integrity is a core part of our culture as a community of scholars. At its heart, academic integrity is about behaving ethically. This means that all members of the community commit to honest and responsible scholarly practice and to upholding these values with respect and fairness. The Australian National University commits to embedding the values of academic integrity in our teaching and learning. We ensure that all members of our community understand how to engage in academic work in ways that are consistent with, and actively support academic integrity. The ANU expects staff and students to uphold high standards of academic integrity and act ethically and honestly, to ensure the quality and value of the qualification that you will graduate with. The University has policies and procedures in place to promote academic integrity and manage academic misconduct. Visit the following Academic honesty & plagiarism website for more information about academic integrity and what the ANU considers academic misconduct. The ANU offers a number of services to assist students with their assignments, examinations, and other learning activities. The Academic Skills and Learning Centre offers a number of workshops and seminars that you may find useful for your studies.

Online Submission

The ANU uses Turnitin to enhance student citation and referencing techniques, and to assess assignment submissions as a component of the University's approach to managing Academic Integrity. Unless an exemption has been approved by the Associate Dean (Education) submission must be through Turnitin. Please keep a copy of the assignment for your records .For additional information regarding Turnitin please visit the ANU Online website.

Hardcopy Submission

Students completing hardcopy LME's (assessment item 3) will submit their exams to the lecturer at the end of class.

Late Submission

Late submission of assessment tasks without an extension are penalised at the rate of 5% of the possible marks available per working day or part thereof. Late submission of assessment tasks is not accepted after 10 working days after the due date, or on or after the date specified in the course outline for the return of the assessment item.

Referencing Requirements

Accepted academic practice for referencing sources that you use in presentations can be found via the links on the Wattle site, under the file named “ANU and College Policies, Program Information, Student Support Services and Assessment”. Alternatively, you can seek help through the Students Learning Development website.

Returning Assignments

Marks for the pre-seminar outline document and tutorial will be made available through Wattle before Friday September 2nd. Verbal feedback from lecturer will be provided during tutorial on Wednesday Aug 24th.

Results for LMEs will be made available through Wattle within 2 weeks of completion.

Feedback and grades for the seminars will be returned by Friday Nov 5th.

Extensions and Penalties

Extensions and late submission of assessment pieces are covered by the Student Assessment (Coursework) Policy and Procedure The Course Convener may grant extensions for assessment pieces that are not examinations or take-home examinations. If you need an extension, you must request an extension in writing on or before the due date. If you have documented and appropriate medical evidence that demonstrates you were not able to request an extension on or before the due date, you may be able to request it after the due date.

Resubmission of Assignments

Resubmission of assignments is only permitted for the HPO Journal Club Essay for the purposes of originality checking via Turnitin.

Privacy Notice

The ANU has made a number of third party, online, databases available for students to use. Use of each online database is conditional on student end users first agreeing to the database licensor’s terms of service and/or privacy policy. Students should read these carefully. In some cases student end users will be required to register an account with the database licensor and submit personal information, including their: first name; last name; ANU email address; and other information. In cases where student end users are asked to submit ‘content’ to a database, such as an assignment or short answers, the database licensor may only use the student’s ‘content’ in accordance with the terms of service — including any (copyright) licence the student grants to the database licensor. Any personal information or content a student submits may be stored by the licensor, potentially offshore, and will be used to process the database service in accordance with the licensors terms of service and/or privacy policy. If any student chooses not to agree to the database licensor’s terms of service or privacy policy, the student will not be able to access and use the database. In these circumstances students should contact their lecturer to enquire about alternative arrangements that are available.

Distribution of grades policy

Academic Quality Assurance Committee monitors the performance of students, including attrition, further study and employment rates and grade distribution, and College reports on quality assurance processes for assessment activities, including alignment with national and international disciplinary and interdisciplinary standards, as well as qualification type learning outcomes. Since first semester 1994, ANU uses a grading scale for all courses. This grading scale is used by all academic areas of the University.

Support for students

The University offers students support through several different services. You may contact the services listed below directly or seek advice from your Course Convener, Student Administrators, or your College and Course representatives (if applicable).

• ANU Health, safety & wellbeing for medical services, counselling, mental health and spiritual support
• ANU Diversity and inclusion for students with a disability or ongoing or chronic illness
• ANU Dean of Students for confidential, impartial advice and help to resolve problems between students and the academic or administrative areas of the University
• ANU Academic Skills and Learning Centre supports you make your own decisions about how you learn and manage your workload.
• ANU Counselling Centre promotes, supports and enhances mental health and wellbeing within the University student community.
• ANUSA supports and represents undergraduate and ANU College students
• PARSA supports and represents postgraduate and research students